Nature Communications · 2023 · 19 citations · 59 references
Life SciencesBiochemistryEntomologyCell SignalingInsect PhysiologySensory PhysiologyLigand BindingOlfactory PhysiologyReceptor BindingReceptor ModelingReceptor PhysiologyReceptor-ligand InteractionsCo-receptor BindingCo-receptor FunctionOdorant ReceptorsOdorant-binding ProteinsOlfactory Receptor BiologyOlfactory Receptor PhysiologyOlfactory SignalingReceptor-ligand Recognition
In numerous insects, the olfactory receptor family forms a unique class of heteromeric cation channels. Recent progress in resolving the odorant receptor structures offers unprecedented opportunities for deciphering their molecular mechanisms of ligand recognition. Unexpectedly, these structures in apo or ligand-bound states did not reveal the pathway taken by the ligands between the extracellular space and the deep internal cavities. By combining molecular modeling with electrophysiological recordings, we identified amino acids involved in the dynamic entry pathway and the binding of VUAA1 to Drosophila melanogaster's odorant receptor co-receptor (Orco). Our results provide evidence for the exact location of the agonist binding site and a detailed and original mechanism of ligand translocation controlled by a network of conserved residues. These findings would explain the particularly high selectivity of Orcos for their ligands.
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Highly accurate protein structure prediction with AlphaFold
John Jumper, Alexander Pritzel, Tim Green et al. · Nature · 2021 · 45.2K citations · Full text
SWISS-MODEL: homology modelling of protein structures and complexes
Andrew Waterhouse, Martino Bertoni, Stefan Bienert et al. · Nucleic Acids Research · 2018 · 13.6K citations · Full text