Concepedia
Nature Communications · 2023 · 67 citations · 78 references
Open access
78
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love, Wolfgang Huber, Simon Anders · Genome biology · 2014 · 94.7K citations · Full text
clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
Guangchuang Yu, Li-Gen Wang, Yanyan Han et al. · OMICS A Journal of Integrative Biology · 2012 · 36K citations · Full text
Genetics, Genomics, Gene Recognition +24
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Yang Liao, Gordon K. Smyth, Wei Shi · Bioinformatics · 2013 · 27.4K citations · Full text
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim, Ben Langmead, Steven L. Salzberg · Nature Methods · 2015 · 24.9K citations · Full text
Hardware Security, Engineering, Hardware Acceleration +7
An integrated encyclopedia of DNA elements in the human genome
Nature · 2012 · 18.9K citations · Full text
Chromatin, Dna Sequencing, Dna +12