Concepedia

Rapid adaptive and acute stimulatory responses to low salinity stress in Pacific white shrimp (Litopenaeus vannamei): Insights from integrative transcriptomic and proteomic analysis

Huijie Lü, Wenchun Chen, Kai Peng, Minwei Huang, Jichen Zhao, Xiaoying Chen, Yuping Sun, Zhuohao Ruan, Chaozheng Li, Ding Liu,

Comparative Biochemistry and Physiology Part D Genomics and Proteomics · 2023 · 20 citations · 44 references

DOI

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References

44

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love, Wolfgang Huber, Simon Anders · Genome biology · 2014 · 100.5K citations · Full text

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<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson, Davis J. McCarthy, Gordon K. Smyth · Bioinformatics · 2009 · 44.5K citations · Full text

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang, Brad T. Sherman, Richard A. Lempicki · Nature Protocols · 2008 · 37.4K citations

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RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

Bo Li, Colin N. Dewey · BMC Bioinformatics · 2011 · 23.4K citations · Full text

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DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

Likun Wang, Zhixing Feng, Xi Wang et al. · Bioinformatics · 2009 · 4.9K citations · Full text

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