Genetic Resources · 2023 · 24 citations · 21 references
AgricultureCrop SciencesGeneticsGenomicsMolecular BreedingPlant GeneticsBreeding Program DesignCrop GenomicsGenotyping PlatformsHigh-throughput GenotypingMarker DiscoveryBarriersBreeding Program EvaluationGenetic Marker DevelopmentGenotypic Data ManagementHigh-density GenotypingMolecular Marker BreedingMolecular Marker-assisted Breeding
Small public breeding programmes have many barriers to adopting technology, particularly creating and using genetic marker panels for genomic-based decisions in selection. Here we report the creation of a DArTag panel of 3,000 loci distributed across the alfalfa (Medicago sativa L.) genome for use in molecular breeding and genomic insight. The creation of this marker panel brings cost-effective and rapid genotyping capabilities to alfalfa breeding programmes. The open access provided by this platform will allow genetic data sets generated on the marker panel to be compared and joined across projects, institutions and countries. This genotyping resource has the power to make routine genotyping a reality for any breeder of alfalfa.
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
Genomic Selection for Crop Improvement
Elliot L. Heffner, Mark E. Sorrells, Jean‐Luc Jannink · Crop Science · 2009 · 1.7K citations
Agriculture, Crop Sciences, Genetics +14