Concepedia

Diagnostic value of plasma and blood cells metagenomic next-generation sequencing in patients with sepsis

Chen Wu, Xin Yu, Wei Gai, Yanxia Liu, Ying Qi, Yafeng Zheng, Na Zhang, Guoqiang Li, Bing Chen

Biochemical and Biophysical Research Communications · 2023 · 16 citations · 22 references

Concepts

Veterinary MedicineInfectious DiseasesMolecular MedicineGenomicsMetagenomicsSepsisBiomarkers In SepsisClinical GenomicsMetagenomic AnalysisSepsis DiagnosisSepsis ManagementShotgun Metagenomic SequencingBiomarker-based Sepsis DiagnosisClinical MetagenomicsClinical Next-generation SequencingMetagenomic DiagnosisNext-generation Sequencing Diagnosis

References

22

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +13

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

Life Sciences, Bioinformatics, Molecular Biology +11

Improved metagenomic analysis with Kraken 2

Derrick E. Wood, Jennifer Lu, Ben Langmead · Genome biology · 2019 · 7.1K citations · Full text

Life Sciences, Bioinformatics, Microbiology +11

Global, regional, and national age-sex specific mortality for 264 causes of death, 1980–2016: a systematic analysis for the Global Burden of Disease Study 2016

Mohsen Naghavi, Amanuel Alemu Abajobir, Cristiana Abbafati et al. · The Lancet · 2017 · 4.9K citations · Full text

Public Health, Demography, Population Health Sciences +17

Maternal Plasma DNA Sequencing Reveals the Genome-Wide Genetic and Mutational Profile of the Fetus

Yuk Ming Dennis Lo, K.C. Allen Chan, Hao Sun et al. · Science Translational Medicine · 2010 · 1.1K citations

Medicine, Genetics, Molecular Genetics +17