Concepedia

Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision

Marieke Vromman, Jasper Anckaert, Stefania Bortoluzzi, Alessia Buratin, Chia-Ying Chen, Qinjie Chu, Trees‐Juen Chuang, Roozbeh Dehghannasiri, Christoph Dieterich, Xin Dong,

Nature Methods · 2023 · 102 citations · 32 references

DOIFull text

Open access

Concepts

References

32

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

, , +11

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 30.4K citations · Full text

, , +14

Twelve years of SAMtools and BCFtools

Petr Danecek, James Bonfield, Jennifer Liddle et al. · GigaScience · 2021 · 15.9K citations · Full text

, , +10

Circular RNAs are a large class of animal RNAs with regulatory potency

Sebastian Memczak, Marvin Jens, Antigoni Elefsinioti et al. · Nature · 2013 · 8.5K citations

, , +13

Detecting and characterizing circular RNAs

William R. Jeck, Norman E. Sharpless · Nature Biotechnology · 2014 · 2.9K citations · Full text

, , +6