Concepedia

Fragmentomic analysis of circulating tumor DNA-targeted cancer panels

Kyle T. Helzer, Marina N. Sharifi, Jamie M. Sperger, Yue Shi, Matti Annala, Matthew L. Bootsma, Steve Reese, Amy K. Taylor, Katherine R. Kaufmann, Hannah Krause,

Annals of Oncology · 2023 · 65 citations · 45 references

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45

Fast and accurate short read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text

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BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 30.4K citations · Full text

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Crystal structure of the nucleosome core particle at 2.8 Å resolution

Karolin Luger, Armin W. Mäder, Robin K. Richmond et al. · Nature · 1997 · 9.4K citations

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CNVkit: Genome-Wide Copy Number Detection and Visualization from Targeted DNA Sequencing

Eric Talevich, A. Hunter Shain, Thomas Botton et al. · PLoS Computational Biology · 2016 · 2.3K citations · Full text

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Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin

Matthew W. Snyder, Martin Kircher, Andrew J. Hill et al. · Cell · 2016 · 1.5K citations · Full text

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