International Journal of Biological Macromolecules · 2023 · 17 citations · 46 references
Life SciencesBiochemistryCell BiologyCellular BiochemistryDiabetologyWound HealingAntioxidant DefenseChronic Wound PathophysiologyDiabetes MellitusDiabetes Mellitus BiochemistryWound Healing PhysiologyWound Healing ResponseCell Damage MechanismsDermal InjuryDiabetic Wound HealingDiabetic Wound PathophysiologyDiabetic Wound RepairFibroblast ActivationOxidative Stress In DiabetesWound Healing Metabolism
Diabetic chronic wound is a worldwide medical burden related to overdosed methylglyoxal (MGO) synthesis, which is the major precursor of glycation of proteins and DNA and is related to the dysfunction of dermal cells thus leading to chronic refractory wounds. Previous studies proved that earthworm extract accelerates diabetic wound healing and possesses cell proliferation and antioxidative effects. However, the effects of earthworm extract on MGO-damaged fibroblasts, the inner mechanisms of MGO-induced cell damage and the functional components in earthworm extract are still poorly understood. Firstly, we evaluated the bioactivities of the earthworm extract PvE-3 on the diabetic wound model and the diabetic related cell damage model. Then the mechanisms were investigated through transcriptomics, flow cytometry and fluorescence probe. The results revealed that PvE-3 promoted diabetic wound healing and protected fibroblast function in cell-damaged conditions. Meanwhile, the high-throughput screening implied the inner mechanisms of diabetic wound healing and PvE-3 cytoprotection effect were involved in the muscle cell function, the cell cycle regulation and the mitochondrial transmembrane potential depolarization. The functional glycoprotein isolated from PvE-3 possessed EGF-like domain which had a strong binding affinity with EGFR. The findings provided references to explore the potential treatments of diabetic wound healing.
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SWISS-MODEL: homology modelling of protein structures and complexes
Andrew Waterhouse, Martino Bertoni, Stefan Bienert et al. · Nucleic Acids Research · 2018 · 13.6K citations · Full text
ZDOCK server: interactive docking prediction of protein–protein complexes and symmetric multimers
Brian G. Pierce, Kevin Wiehe, Howook Hwang et al. · Bioinformatics · 2014 · 1.8K citations · Full text