Cell Discovery · 2023 · 59 citations · 51 references
Life SciencesDevelopmental BiologyGeneticsEmbryogenesisEmbryologyEpigeneticsDevelopmental EpigeneticsEmbryo DevelopmentEpigenetic Regulation In DevelopmentEpigenetic ReprogrammingZygote FormationZygotic Genome ActivationDevelopmental Epigenetic ReprogrammingEarly Zygotic DevelopmentMaternal Rna DegradationMorula FormationPaternal Genome ReprogrammingZygotic Embryo DevelopmentZygotic EmbryogenesisZygotic Gene Activation
Although parental genomes undergo extensive epigenetic reprogramming to be equalized after fertilization, whether they play different roles in human zygotic genome activation (ZGA) remains unknown. Here, we mapped parental transcriptomes by using human parthenogenetic (PG) and androgenetic (AG) embryos during ZGA. Our data show that human ZGA is launched at the 8-cell stage in AG and bi-parental embryos, but at the morula stage in PG embryos. In contrast, mouse ZGA occurs at the same stage in PG and AG embryos. Mechanistically, primate-specific ZNF675 with AG-specific expression plays a role in human ZGA initiated from paternal genome at the 8-cell stage. AG-specifically expressed LSM1 is also critical for human maternal RNA degradation (MRD) and ZGA. The allelic expressions of ZNF675 and LSM1 are associated with their allelically epigenetic states. Notably, the paternally specific expressions of ZNF675 and LSM1 are also observed in diploid embryos. Collectively, human ZGA is initiated from paternal genome.
51
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets
Yingyao Zhou, Bin Zhou, Lars Pache et al. · Nature Communications · 2019 · 15.6K citations · Full text