Physical Chemistry Chemical Physics · 2023 · 23 citations · 47 references
Natural SciencesChemistryMolecular BiologyMolecular EvolutionNucleic Acid ChemistryPolymer ChemistryNucleic Acid BiophysicsNucleic Acid DynamicsNucleic Acid StructurePolymer PhysicsRibonucleic Acid (Rna) ChemistryCracksDe Novo Nucleotide PolymerizationDna Sequence CompositionNon-equilibrium Steady StatesRna Thermodynamics
-fold at the bottom of the crack compared to the top after 24 hours. We detected enhanced polymerization for 2 different activation chemistries: aminoimidazole-activated DNA nucleotides and 2',3'-cyclic RNA nucleotides. The copolymerization of 2',3'-cGMP and 2',3'-cCMP in the thermal pore showed an increased heterogeneity in sequence composition compared to isothermal drying. Finite element models unravelled the combined polymerization and accumulation kinetics and indicated that the escape of the nucleotides from such a crack is negligible over a time span of years. The thermal non-equilibrium habitat establishes a cell-like compartment that actively accumulates nucleotides for polymerization and traps the resulting oligomers. We argue that the setting creates a pre-cellular non-equilibrium steady state for the first steps of molecular evolution.
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