Frontiers in Microbiology · 2022 · 16 citations · 45 references
Life SciencesBotanyMicrobiologyBacteriologyMicrobial EcologyMicrobial Taxonomy16S Ribosomal Ribonucleic Acid AnalysisBacterial SystematicsMicrobial PhylogeneticsMicrobial PhylogenyPhylogenetic ClassificationPhylogenetic Sequence Analysis16S Ribosomal Rna Gene AnalysisChemotaxonomic CharacterizationChemotaxonomic IdentificationGenotypic Characterization Of IsolatesGenus DescriptionMolecular Identification Of StrainsMultilocus Sequence AnalysisPhenotypic Characterization Of Isolates
Following a screening campaign of bleeding cankers of broadleaf hosts in Great Britain, numerous bacterial strains were isolated, identified by 16S rRNA and protein-coding gene sequencing and ultimately classified. During the course of the study, several Gram-negative, facultatively anaerobic strains were isolated from bleeding Platanus x acerifolia (London plane) and Tilia x europaea (common lime) cankers that could not be assigned to an existing species. Partial 16S rRNA gene sequencing placed these strains in the genus Erwinia , as a close phylogenetic relative of Erwinia toletana . In an effort to determine the taxonomic position of the strains, a polyphasic approach was followed including genotypic, genomic, phenotypic, and chemotaxonomic assays. Multilocus sequence analysis based on four protein-coding genes ( gyrB , rpoB , infB , and atpD ) confirmed the phylogenetic position of the strains as a novel taxon of subgroup 3 of the genus Erwinia , along with E. toletana and E. iniecta , and furthermore, provided support for their reclassification in a novel genus. Whole genome comparisons allowed the delimitation of the novel species and also supported the proposed transfer of subgroup 3 species to a novel genus in the Erwiniaeae . Phenotypically the novel species could be differentiated from E. toletana and E. iniecta , and the novel genus could be differentiated from the closely related genera Erwinia and Mixta . Therefore, we propose (1) the reclassification of E. toletana and E. iniecta in a novel genus, Winslowiella gen. nov., as Winslowiella toletana comb. nov. and Winslowiella iniecta comb. nov., with W. toletana comb. nov. as the type species (type strain A37 T = CFBP 6631 T = ATCC 700880 T = CECT 5263 T ), and (2) classification of the novel strains as Winslowiella arboricola sp. nov. (type strain BAC 15a-03b T = LMG 32576 T = NCPPB 4696 T ).
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