Nature · 2022 · 150 citations · 54 references
Life SciencesImmunologyMolecular BiologyChromatin BiologyChromatin StructureEpigeneticsChromatinHistone ModificationsHistone ProteinsEpigenetic Chromatin RegulationEpigenetic RegulationEpigenetic Regulation Of Viral GenesEpigenetic Reprogramming By VirusesEpigenomic RegulationSars-cov-2 InfectionViral-mediated Epigenetic Alterations
54
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.9K citations · Full text