Frontiers in Plant Science · 2022 · 14 citations · 38 references
AgriculturePlant BiologyPlant SciencesPlant BiochemistryPlant Molecular BiologyPlant-microbe InteractionsBacterial Pathogenesis In PlantsBacterial Plant PathogensPathogen RecognitionPathogen Virulence FactorsPlant Defense ResponsesPlant-pathogen InteractionsBcl-2 Protein ExpressionDefense Suppression By Pathogen EffectorsEffector Recognition By Host PlantsHost Plant RecognitionPathogen Effector ProteinsPlant Disease Resistance MechanismsPlant Pathogen EffectorsProtein Expression Levels
Clubroot, caused by Plasmodiophora brassicae , is a major disease of crucifers. Effector proteins are important virulence factors in host recognition of pathogens and the interactions between pathogens and hosts. Secretory proteins, as effector candidates, have been studied in the interaction between Plasmodiophora brassicae and its hosts. In this study, 518 secretary proteins were screened from the Plasmodiophora brassicae genome. A total of 63 candidate effectors that induce or suppress cell death were identified using agroinfiltration-mediated transient expression in Nicothiana benthamiana . The candidate effectors, Pb4_102097 and Pb4_108104 showed high expressing level in the stage of rest spore maturity, could induce cell death and were associated with H 2 O 2 accumulation in N. benthamiana leaves. In addition, 55 candidate effectors that could suppress BAX (Bcl-2-associated X protein) induced cell death, and 21 out of which could suppress the immunity caused by bacterial pathogen Pseudomonas syringae pv. tomato strain DC3000 expressing avrRps4 in Arabidopsis . Based on the expression pattern in different stages, 28 candidate effectors showed high expression levels during the primary and secondary infection stage. Five candidate effectors containing the RXLR motif functioned in the cytoplasm and cell membrane.
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Pfam: the protein families database
ROBERT FINN, Alex Bateman, Jody Clements et al. · Nucleic Acids Research · 2013 · 6.5K citations · Full text
Locating proteins in the cell using TargetP, SignalP and related tools
Olof Emanuelsson, Søren Brunak, Gunnar von Heijne et al. · Nature Protocols · 2007 · 3.2K citations
Hans Thordal‐Christensen, Ziguo Zhang, Yangdou Wei et al. · The Plant Journal · 1997 · 2.7K citations · Full text