Concepedia

Mesenchymal and adrenergic cell lineage states in neuroblastoma possess distinct immunogenic phenotypes

Satyaki Sengupta, Sanjukta Das, Ângela C. Crespo, Annelisa M. Cornel, Anand G. Patel, Navin R. Mahadevan, Marco Campisi, Alaa Kassim Ali, Bandana Sharma, Jared H. Rowe,

Nature Cancer · 2022 · 88 citations · 71 references

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71

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

Guangchuang Yu, Li-Gen Wang, Yanyan Han et al. · OMICS A Journal of Integrative Biology · 2012 · 38.3K citations

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Robust enumeration of cell subsets from tissue expression profiles

Aaron M. Newman, Chih Long Liu, Michael R. Green et al. · Nature Methods · 2015 · 14.1K citations · Full text

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Fast, sensitive and accurate integration of single-cell data with Harmony

Ilya Korsunsky, Nghia Millard, Jean Fan et al. · Nature Methods · 2019 · 10.5K citations · Full text

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Dimensionality reduction for visualizing single-cell data using UMAP

Étienne Becht, Leland McInnes, John Healy et al. · Nature Biotechnology · 2018 · 5.8K citations

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Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage

Dvir Aran, Agnieszka Looney, Leqian Liu et al. · Nature Immunology · 2019 · 5.3K citations

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