Genetic diversity analysis and core collection construction for Amaranthus tricolor germplasm based on genome-wide single-nucleotide polymorphisms

phytools: an R package for phylogenetic comparative biology (and other things)

Liam J. Revell · Methods in Ecology and Evolution · 2011 · 9.8K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +11

TASSEL: software for association mapping of complex traits in diverse samples

Peter J. Bradbury, Zhiwu Zhang, Dallas E. Kroon et al. · Bioinformatics · 2007 · 8.3K citations · Full text

Life Sciences, Bioinformatics, Genetics +17

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

Robert J. Elshire, Jeffrey C. Glaubitz, Qi Sun et al. · PLoS ONE · 2011 · 6.8K citations · Full text

Life Sciences, Genetics, Plant Biology +14

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

Brant K. Peterson, Jesse N. Weber, Emily H. Kay et al. · PLoS ONE · 2012 · 3.9K citations · Full text

Life Sciences, Genetics, Molecular Genetics +17

<i>adegenet 1.3-1</i> : new tools for the analysis of genome-wide SNP data

Thibaut Jombart, Ismaïl Ahmed · Bioinformatics · 2011 · 3.3K citations · Full text

Life Sciences, Bioinformatics, Genetics +12