Frontiers in Genetics · 2022 · 19 citations · 37 references
MedicineBioinformaticsOncologyCutaneous OncologyMolecular OncologyTumor MicroenvironmentCancer BiomarkersCancer ImmunotherapyImmuno-oncology BiomarkersMalignant NeoplasmsMelanocytic TumorsMolecular Tumor ProfilingCox RegressionImmune Gene Expression SignaturesImmune Microenvironment AnalysisLasso RegressionMelanoma BiomarkersProgrammed Cell Death PathwaysProgrammed Cell Death RegulationSkin Tumor Prognosis
Cuproptosis is a newly discovered new mechanism of programmed cell death, and its unique pathway to regulate cell death is thought to have a unique role in understanding cancer progression and guiding cancer therapy. However, this regulation has not been studied in SKCM at present. In this study, data on Skin Cutaneous Melanoma (SKCM) patients were downloaded from the TCGA database. We screened the genes related to cuproptosis from the published papers and confirmed the lncRNAs related to them. We applied Univariate/multivariate and LASSO Cox regression algorithms, and finally identified 5 cuproptosis-related lncRNAs for constructing prognosis prediction models (VIM-AS1, AC012443.2, MALINC1, AL354696.2, HSD11B1-AS1). The reliability and validity test of the model indicated that the model could well distinguish the prognosis and survival of SKCM patients. Next, immune microenvironment, immunotherapy analysis, and functional enrichment analysis were also performed. In conclusion, this study is the first analysis based on cuproptosis-related lncRNAs in SKCM and aims to open up new directions for SKCM therapy.
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