Science · 2022 · 357 citations · 69 references
MedicineCell BiologyOncologyCell SignalingMolecular OncologySignal TransductionCancer Cell SignalingCancer ProgressionCancer Stem CellsMetastatic Signaling PathwaysOncogenic Signaling PathwaysProstate CancerCancer Cell PlasticityCastration-resistant Prostate Cancer TherapyCell Lineage PlasticityFibroblast Growth Factor Receptor SignalingJanus Kinase Inhibitor TherapyJanus Kinase-stat Signaling ActivationLuminal CellsOrganoid Culture
Drug resistance in cancer is often linked to changes in tumor cell state or lineage, but the molecular mechanisms driving this plasticity remain unclear. Using murine organoid and genetically engineered mouse models, we investigated the causes of lineage plasticity in prostate cancer and its relationship to antiandrogen resistance. We found that plasticity initiates in an epithelial population defined by mixed luminal-basal phenotype and that it depends on increased Janus kinase (JAK) and fibroblast growth factor receptor (FGFR) activity. Organoid cultures from patients with castration-resistant disease harboring mixed-lineage cells reproduce the dependency observed in mice by up-regulating luminal gene expression upon JAK and FGFR inhibitor treatment. Single-cell analysis confirms the presence of mixed-lineage cells with increased JAK/STAT (signal transducer and activator of transcription) and FGFR signaling in a subset of patients with metastatic disease, with implications for stratifying patients for clinical trials.
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Near-optimal probabilistic RNA-seq quantification
Nicolas Bray, Harold Pimentel, Páll Melsted et al. · Nature Biotechnology · 2016 · 11K citations · Full text
UMAP: Uniform Manifold Approximation and Projection
Leland McInnes, John Healy, Nathaniel Saul et al. · The Journal of Open Source Software · 2018 · 9.6K citations · Full text