Phytopathology · 2022 · 10 citations · 42 references
AgricultureCrop SciencesPlant SciencesBreeding For Disease ResistanceGermplasm EvaluationPlant GeneticsBreeding For Fungal Disease ResistanceDisease ResistanceDisease Resistance GeneticsPlant Disease ResistanceResistance Gene DiscoveryResistance GenesBlight Resistance BreedingHost Resistance GenesHost Resistance To BlightHost Susceptibility GenesPlant Disease Resistance GenesPlant Fungal DiseasePlant Resistance GenesResistance Mechanism Identification
Gummy stem blight (GSB), caused by Didymella bryoniae, is a devastating fungal disease of melon worldwide. Breeding GSB-resistant cultivars with host resistance genes is considered the most economic and effective strategy to control this disease. In this study, 260 melon germplasm resources were screened for resistance to GSB, and an inbred line, H55R, that exhibited immunity to GSB was identified. To further understand the resistance mechanism of H55R against GSB, an F 2 population was obtained from a cross between the GSB-susceptible line A15 and H55R, and genetic analysis indicated that the GSB resistance in H55R was controlled by a single dominant gene, tentatively named Gsb-7(t). The Gsb-7(t) gene was finally delimited to a 140-kb interval on chromosome 7 using bulked segregant analysis and chromosome walking strategies. Ten putative genes were annotated in this region that contains a wall-associated receptor kinase (WAK) gene MELO3C010403. The MELO3C010403 gene contains two alternative transcripts, MELO3C010403-T1 and MELO3C010403-T2, with five and seven nonsynonymous mutation sites, respectively. Gene expression analysis showed that expression of MELO3C010403-T2 but not MELO3C010403-T1 was significantly induced by D. bryoniae at 24 h postinoculation, indicating that the MELO3C010403-T2 transcript of MELO3C010403 was the most likely candidate gene of Gsb-7(t). Our results offer new genetic resources and will be helpful for the development of GSB-resistant melon cultivars in the future.
42
Fast and accurate short read alignment with Burrows–Wheeler transform
Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
Pablo Cingolani, Adrian E. Platts, Le Lily Wang et al. · Fly · 2012 · 12.7K citations · Full text
Rapid isolation of high molecular weight plant DNA
Michael G. Murray, William F. Thompson · Nucleic Acids Research · 1980 · 12.4K citations · Full text
Richard W. Michelmore, Ilan Paran, Rick Kesseli · Proceedings of the National Academy of Sciences · 1991 · 4.6K citations