Journal of Virology · 2022 · 18 citations · 68 references
Life SciencesCell BiologyMolecular BiologyEpigeneticsGene ExpressionMolecular VirologyAntiretroviral TherapyAntiviral TherapyCrispr-cas SystemsRna InterferenceViral Immune EvasionVirus-induced Gene SilencingHiv Antiretroviral TherapyImmune Receptor RecognitionImmune Recognition Receptors
HIV-1-infected cells, which can survive drug treatment and immune cell killing, prevent an HIV-1 cure. Immune recognition of infected cells requires HIV-1 protein expression; however, HIV-1 protein expression is limited in infected cells after long-term therapy. The ways in which the HIV-1 provirus is blocked from producing protein are unknown. We identified a new host protein that regulates HIV-1 gene expression. We also provided a new method of studying HIV-1-host factor interactions in cells from infected individuals. These improvements may enable future strategies to reactivate HIV-1 in infected individuals so that infected cells can be killed by immune cells, drug treatment, or the virus itself.
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Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
Cutadapt removes adapter sequences from high-throughput sequencing reads
Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text