Concepedia

A well-supported nuclear phylogeny of Poaceae and implications for the evolution of C4 photosynthesis

Wei‐Chen Huang, Lin Zhang, J. Travis Columbus, Yi Hu, Yiyong Zhao, Lin Tang, Zhenhua Guo, Wenli Chen, Michael R. McKain, Madelaine Bartlett,

Molecular Plant · 2022 · 160 citations · 102 references

DOIFull text

Open access

Concepts

Abstract

ppc genes. This study provides valuable resources and a robust phylogenetic framework for evolutionary analyses of the grass family.

References

102

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis · Bioinformatics · 2014 · 34.3K citations · Full text

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IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

Lam-Tung Nguyen, Heiko A. Schmidt, Arndt von Haeseler et al. · Molecular Biology and Evolution · 2014 · 27.5K citations · Full text

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Full-length transcriptome assembly from RNA-Seq data without a reference genome

Manfred Grabherr, Brian J. Haas, Moran Yassour et al. · Nature Biotechnology · 2011 · 22.6K citations · Full text

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Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega

Fabian Sievers, Andreas Wilm, David Dineen et al. · Molecular Systems Biology · 2011 · 16.2K citations · Full text

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trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

Salvador Capella-Gutiérrez, José M. Silla-Martínez, Toni Gabaldón · Bioinformatics · 2009 · 13.6K citations · Full text

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