Veterinary Medicine and Science · 2021 · 12 citations · 40 references
Veterinary MedicineInfectious DiseasesVeterinary MicrobiologyMolecular VirologyVirologyZoonotic Disease EpidemiologyAnimal Infectious DiseasesSerological DiagnosticsVeterinary VirologyZoonotic Disease DetectionZoonotic InfectionsZoonotic VirusesComparative Data AnalysisFeline Infectious DiseasesSars-cov-2 InfectionSerological ComparisonSerological DetectionSerological EpidemiologySerological IdentificationZoonotic Pathogen Characterization
Although there are several reports in the literature of SARS-CoV-2 infection in cats, few SARS-CoV-2 sequences from infected cats have been published. In this study, SARS-CoV-2 infection was evaluated in two cats by clinical observation, molecular biology (qPCR and NGS), and serology (microsphere immunoassay and seroneutralization). Following the observation of symptomatic SARS-CoV-2 infection in two cats, infection status was confirmed by RT-qPCR and, in one cat, serological analysis for antibodies against N-protein and S-protein, as well as neutralizing antibodies. Comparative analysis of five SARS-CoV-2 sequence fragments obtained from one of the cats showed that this infection was not with one of the three recently emerged variants of SARS-CoV-2. This study provides additional information on the clinical, molecular, and serological aspects of SARS-CoV-2 infection in cats.
40
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
Minimap2: pairwise alignment for nucleotide sequences
Heng Li · Bioinformatics · 2018 · 16.8K citations · Full text
Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR
Victor M. Corman, Olfert Landt, Marco Kaiser et al. · Eurosurveillance · 2020 · 8.2K citations · Full text