Concepedia

A multi-omic single-cell landscape of human gynecologic malignancies

Matthew J. Regner, Kamila Wiśniewska, Susana García‐Recio, Aatish Thennavan, Raúl Méndez-Giráldez, Venkat S. Malladi, Gabrielle M. Hawkins, Joel S. Parker, Charles M. Perou, Victoria Bae‐Jump,

Molecular Cell · 2021 · 136 citations · 106 references

Open access

Concepts

MedicineCell BiologyOncologyGynecologic OncologyMolecular OncologyTumor HeterogeneityOvarian CancerSingle-cell AnalysisSingle-cell GenomicsSingle-cell Multi-omics IntegrationSingle-cell Rna Sequencing AnalysisSingle-cell TranscriptomicsSingle-cell Cancer GenomicsSingle-cell MultiomicsSingle-cell Omics AnalysisSingle-cell Tumor AnalysisSingle-cell Tumor Genomics

References

106

R: A Language and Environment for Statistical Computing

R Core Team · 2000 · 353K citations · Full text

Natural Sciences, Computer Science, Statistical Computing +10

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love, Wolfgang Huber, Simon Anders · Genome biology · 2014 · 100.5K citations · Full text

Life Sciences, Bioinformatics, Biostatistics +15

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 30.4K citations · Full text

Life Sciences, Bioinformatics, Genetics +14

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.9K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +11

An integrated encyclopedia of DNA elements in the human genome

Nature · 2012 · 19.4K citations · Full text

Life Sciences, Genetics, Molecular Genetics +16