Biomedicines · 2021 · 27 citations · 35 references
Life SciencesCardiologyGeneticsGene ExpressionGenomicsMedical GeneticsDna SequencingInherited CardiomyopathiesClinical Next-generation SequencingExon SkippingMissense Variant AnalysisMutationMyocardial Tissue CharacterizationNext-generation Sequencing In CardiomyopathySplice-site MutationsSplicing Defect Analysis
Currently, little is known about the genetic background of restrictive cardiomyopathy (RCM). Herein, we screened an index patient with RCM in combination with atrial fibrillation using a next generation sequencing (NGS) approach and identified the heterozygous mutation DES-c.735G>C. As DES-c.735G>C affects the last base pair of exon-3, it is unknown whether putative missense or splice site mutations are caused. Therefore, we applied nanopore amplicon sequencing revealing the expression of a transcript without exon-3 in the explanted myocardial tissue of the index patient. Western blot analysis verified this finding at the protein level. In addition, we performed cell culture experiments revealing an abnormal cytoplasmic aggregation of the truncated desmin form (p.D214-E245del) but not of the missense variant (p.E245D). In conclusion, we show that DES-c.735G>C causes a splicing defect leading to exon-3 skipping of the DES gene. DES-c.735G>C can be classified as a pathogenic mutation associated with RCM and atrial fibrillation. In the future, this finding might have relevance for the genetic understanding of similar cases.
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Sue Richards, Nazneen Aziz, Sherri J. Bale et al. · Genetics in Medicine · 2015 · 32.2K citations · Full text
Minimap2: pairwise alignment for nucleotide sequences
Heng Li · Bioinformatics · 2018 · 16.8K citations · Full text
Alison D. Tang, Cameron M. Soulette, Marijke J. van Baren et al. · Nature Communications · 2020 · 560 citations · Full text
Mutations in<i>FLNC</i>are Associated with Familial Restrictive Cardiomyopathy
Andreas Brodehl, Raechel A. Ferrier, Sara Hamilton et al. · Human Mutation · 2015 · 178 citations
Life Sciences, Cardiology, Genetics +16