International Journal of General Medicine · 2021 · 30 citations · 22 references
MedicineMolecular BiologyOncologyGene ExpressionMolecular OncologyTumor MicroenvironmentCancer BiomarkersCancer GenomicsCancer TranscriptomicsFunctional GenomicsMolecular Tumor ProfilingBreast Cancer GenomicsBreast Cancer PrognosisDifferential Co-expression AnalysisFunctional Genomics In CancerImmune Microenvironment PrognosisIron Regulatory ProteinsIron-regulated Gene ExpressionKegg Pathway Enrichment
Background: Ferroptosis is the latest-discovered, iron-dependent form of regulated cell death. It has been increasingly recognized that ferroptosis-related genes participate in oncogenesis and development of cancers, including breast cancer ( BRCA ). Thus, It is important to explore the biofunctions of ferroptosis-related genes in BRCA . Methods: Transcriptome microarray datasets (GSE22358, GSE9014 and GSE8977, GSE2990 and GSE2034) and TCGA- BRCA were retrieved for analyses. And a variety of computational tools were used to identify the roles and associated biological functions in BRCA . Results: Two ferroptosis-related genes ( AKR1C1 and AKR1C3 ) were significantly expressed in GSE22358, GSE9014 and GSE8977. Higher expression of AKR1C1 was related with favorable prognosis. TCGA- BRCA further confirmed the expression of AKR1C1 and the prognostic value of AKR1C1 . Co-expression analyses showed the most enriched GO term and KEGG pathways were termination of DNA-templated transcription and Fanconi anemia pathway. Subsequently, immunological analyses showed AKR1C1 was significantly associated with various immune infiltration cells; among these, dendritic cells, neutrophils, macrophages were the top three infiltrating cells. Furthermore, AKR1C1 was also associated with multiple immunostimulatory molecules and chemokines, including PD-1, PD-L1, CTLA4, B7-H3, VSIR, IL-6, BTLA, CXCL2, and CCR7. These results indicated the potential roles of AKR1C1 in the immune reaction during the pathogenesis of breast cancer. Conclusion: This study firstly demonstrated that ferroptosis-related gene, AKR1C1 , could be associated with immune microenvironment, thereby influencing the development and prognosis of patient with breast cancer. Keywords: breast cancer, AKR1C1, ferroptosis, immune microenvironment, immune infiltration
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Ferroptosis: An Iron-Dependent Form of Nonapoptotic Cell Death
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Life Sciences, Immunology, Oncology +17