Science Advances · 2021 · 166 citations · 68 references
HumanitiesArchaeologyGeneticsHuman EvolutionPaleoanthropologyPrehistoric ArchaeologyAncient DnaAncient Dna GenomicsGenealogyPaleolithic ArchaeologyPopulation HistoryPrehistoric Near Eastern ArchaeologyArchaeogenetic Lineage AnalysisChronological GenomicsHistoric Baseline ReconstructionHistorical Gene Flow ReconstructionHuman Demographic HistoryHuman Migration HistoryPopulation History ReconstructionPrehistoric Eurasia
Europe's prehistory oversaw dynamic and complex interactions of diverse societies, hitherto unexplored at detailed regional scales. Studying 271 human genomes dated ~4900 to 1600 BCE from the European heartland, Bohemia, we reveal unprecedented genetic changes and social processes. Major migrations preceded the arrival of "steppe" ancestry, and at ~2800 BCE, three genetically and culturally differentiated groups coexisted. Corded Ware appeared by 2900 BCE, were initially genetically diverse, did not derive all steppe ancestry from known Yamnaya, and assimilated females of diverse backgrounds. Both Corded Ware and Bell Beaker groups underwent dynamic changes, involving sharp reductions and complete replacements of Y-chromosomal diversity at ~2600 and ~2400 BCE, respectively, the latter accompanied by increased Neolithic-like ancestry. The Bronze Age saw new social organization emerge amid a ≥40% population turnover.
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The Sequence Alignment/Map format and SAMtools
Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text
Fast and accurate short read alignment with Burrows–Wheeler transform
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