ACS Central Science · 2021 · 78 citations · 50 references
Life SciencesBiologyMolecular BiologyMolecular VirologyStructural BiologyVirologyLigand BindingProtein StructureProtein-ligand BindingProtein-ligand InteractionsProtein-ligand RecognitionReceptor-ligand InteractionsAffinity LigandsAffinity SelectionCyclic Peptide LibrariesMrna DisplayPeptide Binding AffinitySars-cov-2 InfectionViral Receptor Binding DomainsViral Spike Proteins
) in the nanomolar range (15-550 nM) to the RBD. The highest affinity ligand could be used as an affinity reagent to detect the spike protein in solution by ELISA, and the cocrystal structure of this molecule bound to the RBD demonstrated that it binds to a cryptic binding site, displacing a β-strand near the C-terminus. Our findings provide key mechanistic insight into the binding of peptide ligands to the SARS-CoV-2 spike RBD, and the ligands discovered in this work may find future use as reagents for diagnostic applications.
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