Antimicrobial Agents and Chemotherapy · 2021 · 14 citations · 38 references
Life SciencesInfectious DiseasesMicrobiologyAntimicrobial ResistanceBacteriologyMedical MicrobiologyAntibacterial ResistanceAntibiotic ResistanceBeta-lactam ResistanceCarbapenem ResistanceMultidrug ResistancePlasmid-mediated ResistanceCarbapenem AntibioticsCarbapenem Resistance MechanismsCarbapenem Resistance PlasmidsCarbapenem-resistant EnterobacteralesEnterobacterales ResistanceKlebsiella Pneumoniae CarbapenemaseKlebsiella Pneumoniae ResistancePlasmid Fitness Cost
Meropenem is a clinically important antibacterial reserved for treatment of multiresistant infections. In meropenem-resistant bacteria of the family Enterobacterales , New Delhi metallo-β-lactamase 1 (NDM-1) is considerably more common than IMP-1, despite both metallo-β-lactamases (MBLs) hydrolyzing meropenem with almost identical kinetics.
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
Prokka: rapid prokaryotic genome annotation
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Identification of acquired antimicrobial resistance genes
Ea Zankari, Henrik Hasman, Salvatore Cosentino et al. · Journal of Antimicrobial Chemotherapy · 2012 · 5.2K citations · Full text