Bioengineered · 2021 · 84 citations · 30 references
Life SciencesBioinformaticsMolecular BiologyGene ExpressionNetwork BiologySepsisDifferential Gene Expression AnalysisGene Co-expression AnalysisGene Coexpression NetworksNoncoding Rna BiologyNoncoding Rna FunctionNoncoding Rna TranscriptomicsCo-regulated Gene ModulesCoexpression Network AnalysisDifferential Co-expression AnalysisDifferential Transcript ExpressionGene Co-expression Network AnalysisGene Expression Network AnalysisNoncoding Rna Differential Expression AnalysisWeighted Gene Coexpression Network Analysis
: mRNA: messenger RNA; lncRNA: long noncoding RNAs; GEO: Gene Expression Omnibus; WGCNA: weighted gene co-expression network analysis; GO: Gene Ontology; KEGG: Kyoto Encyclopedia of Genes and Genomes; SIRS: systemic inflammatory response syndrome; TOM: topological overlap measure; BP: biological process; MF: molecular function; CC: cellular component; ROC: receiver operating characteristic curve; AUC: area under curve; MAPK14: Mitogen-activated protein kinase 14; ALI: acute lung injury; ITGAM: Integrin subunit alpha M; HK3: Hexokinase 3; LPS: lipopolysaccharide; 5-LO: 5-lipoxygenase; LTs: leukotrienes; LTB4R: leukotriene B4 receptor.
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WGCNA: an R package for weighted correlation network analysis
Peter Langfelder, Steve Horvath · BMC Bioinformatics · 2008 · 29.1K citations · Full text
Scott L. Weiss, Mark Peters, Waleed Alhazzani et al. · Pediatric Critical Care Medicine · 2020 · 1.2K citations · Full text
Marc Carlson, Bin Zhang, Zixing Fang et al. · BMC Genomics · 2006 · 355 citations · Full text
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