INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2019 · 32 citations · 33 references
Life SciencesMarine BiologyMarine SciencesMarine MicrobiologyMicrobial EcologyMicrobial MetabolismBacterial MetabolismDeep-sea MicrobiologyHydrothermal Vent BiologyHydrothermal Vent MicrobiologyMarine Microbial MetabolismSulfur MetabolismFatty AcidsMesophilic CulturesMicrobial Sulfur MetabolismPolar LipidsSulfide-oxidizing MicroorganismsSulfur-metabolizing MicroorganismsSulfur-oxidizing BacteriaType Strain Characterization
A novel mesophilic, hydrogen-, and sulfur-oxidizing bacterium, designated strain ST-419 T , was isolated from a deep-sea hydrothermal vent plume on the Carlsberg Ridge of the Northwestern Indian Ocean. The isolate was a Gram-staining-negative, non-motile and coccoid to oval-shaped bacterium. Growth was observed at 4–50 °C (optimum 37 °C), pH 5.0–8.6 (optimum pH 6.0) and 1.0–5.0 % (w/v) NaCl (optimum 3.0 %). ST-419 T could grow chemlithoautotrophically with molecular hydrogen, sulfide, elemental sulfur and thiosulfate as energy sources. Molecular oxygen, nitrate and elemental sulfur could be used as electron acceptors. The predominant fatty acids were C 16 : 1 ω7 c , C 18 : 1 ω7 c and C 16 : 0 . The major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The respiratory quinone was menaquinone MK-6 and the G+C content of the genomic DNA was 42.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequences revealed that ST-419 T represented a member of genus Sulfurovum and was most closely related to Sulfurovum riftiae 1812E T , with 97.6 % sequence similarity. The average nucleotide identity (ANI) and digital DNA–DNA hybridization (dDDH) values between ST-419 T and S. riftiae 1812E T were 74.6 and 19.6 %, respectively. The combined genotypic and phenotypic data indicate that ST-419 T represents a novel species within the genus Sulfurovum , for which the name Sulfurovum indicum sp. nov. is proposed. The type strain is ST-419 T (=MCCC 1A17954 T =KCTC 25164 T ).
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MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura, Glen Stecher, Daniel S. Peterson et al. · Molecular Biology and Evolution · 2013 · 47.9K citations · Full text