Bioorganic Chemistry · 2021 · 10 citations · 25 references
PharmacyMedicinal ChemistryDrug DiscoveryEnzymologyStructure-activity RelationshipsAllosteric Modulator DesignEnzyme InhibitionNatural Product Drug DiscoveryNatural Product-based Drug DesignStructure-activity Relationship AnalysisAllosteric Drug DiscoveryAllosteric Ligand DiscoveryAllosteric Site IdentificationAllosteric Site MappingAllosteric Site ModelingMedicinal Chemistry Applications
Candida rugosa lipase (CRL) is an enzyme commonly used in medicinal and biotechnological applications. Allosteric modulators of CRL could aid in modifying lipase-related diseases as well as improving biotechnological processes. Thus, a combinatorial approach of computational in-silico and high-throughput in-vitro screening was used to identify allosteric modulators of CRL. The screening of natural product libraries resulted in 132 compounds of which 53 were tested in-vitro. Subsequently, four inhibitors and three enhancers were identified of which rutin and cynaroside represented the strongest inhibitors of CRL activity (IC50: 227 ± 26 µM and 446 ± 15 µM, respectively) and NP-008496 the strongest enhancer (EC50: 425 ± 18 µM). All three compounds were predicted to bind the same allosteric site suggesting a common mechanism. Therefore, the present study demonstrated a reliable work-flow, identified an allosteric site of CRL and determined inhibitors and enhancers with numerous potential medical and biotechnological applications.
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ZINC: A Free Tool to Discover Chemistry for Biology
John J. Irwin, Teague Sterling, Michael M. Mysinger et al. · Journal of Chemical Information and Modeling · 2012 · 2.6K citations · Full text
Two conformational states of <i>Candida rugosa</i> lipase
Paweł Grochulski, Yunge Li, Joseph D. Schrag et al. · Protein Science · 1994 · 376 citations · Full text