Concepedia
Scientific Reports · 2021 · 17 citations · 60 references
Open access
60
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh, Daron M. Standley · Molecular Biology and Evolution · 2013 · 45.6K citations · Full text
Genetics, Molecular Biology, Major Update +17
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
Fredrik Ronquist, Maxim Teslenko, Paul van der Mark et al. · Systematic Biology · 2012 · 26.9K citations · Full text
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis · Bioinformatics · 2006 · 15.7K citations · Full text
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutiérrez, José M. Silla-Martínez, Toni Gabaldón · Bioinformatics · 2009 · 12.6K citations · Full text
Near-optimal probabilistic RNA-seq quantification
Nicolas Bray, Harold Pimentel, Páll Melsted et al. · Nature Biotechnology · 2016 · 10.4K citations
Functional Genomics, Engineering, Genetics +7