SIAM Review · 2021 · 39 citations · 20 references
ComputingComputer ScienceGeoinformaticsComputational GeometryGeographic Information ScienceTopologyComputational TopologySpatial Data CataloguesSpatial Data MiningSpatial Data RepresentationSpatial Pattern AnalysisTopological ModelingHomologyPersistencePersistent Geometric Data StructuresPersistent HomologySimplicial ComplexesSimplicial HomologyTopological Data StructuresTopological Features
A crucial step in the analysis of persistent homology is the transformation of data into an appropriate topological object (which, in our case, is a simplicial complex). Software packages for computing persistent homology typically construct Vietoris--Rips or other distance-based simplicial complexes on point clouds because they are relatively easy to compute. We investigate alternative methods of constructing simplicial complexes and the effects of making associated choices during simplicial-complex construction on the output of persistent-homology algorithms. We present two new methods for constructing simplicial complexes from two-dimensional geospatial data (such as maps). We apply these methods to a California precinct-level voting data set, and we thereby demonstrate that our new constructions can capture geometric characteristics that are missed by distance-based constructions. Our new constructions can thus yield more interpretable persistence modules and barcodes for geospatial data. In particular, they are able to distinguish short-persistence features that occur only for a narrow range of distance scales (e.g., voting patterns in densely populated cities) from short-persistence noise by incorporating information about other spatial relationships between regions.
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Afra Zomorodian, Gunnar Carlsson · Discrete & Computational Geometry · 2004 · 1.6K citations · Full text
Barcodes: The persistent topology of data
Robert Ghrist · Bulletin of the American Mathematical Society · 2007 · 1.3K citations · Full text