Annals of Neurology · 2020 · 22 citations · 67 references
Life SciencesMolecular BiologyNeuroscienceDrug DiscoveryGene ExpressionMolecular NeuroscienceCancer TranscriptomicsMolecular NeurogeneticsNeurodevelopmental GeneticsDruggable Target DiscoveryGene Expression SignaturesGene-targeted TherapyMessenger Rna Binding ProteinsPrecision Medicine ApplicationsTranscriptome SequencingTranscriptomic Signature Reversal
Advances in genetic discoveries have created substantial opportunities for precision medicine in neurodevelopmental disorders. Many of the genes implicated in these diseases encode proteins that regulate gene expression, such as chromatin-associated proteins, transcription factors, and RNA-binding proteins. The identification of targeted therapeutics for individuals carrying mutations in these genes remains a challenge, as the encoded proteins can theoretically regulate thousands of downstream targets in a considerable number of cell types. Here, we propose the application of a drug discovery approach originally developed for cancer called "transcriptome reversal" for these neurodevelopmental disorders. This approach attempts to identify compounds that reverse gene-expression signatures associated with disease states. ANN NEUROL 2021;89:199-211.
67
Comprehensive Integration of Single-Cell Data
Tim Stuart, Andrew Butler, Paul Hoffman et al. · Cell · 2019 · 16.9K citations · Full text
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
Evan Z. Macosko, Anindita Basu, Rahul Satija et al. · Cell · 2015 · 7.8K citations · Full text
Clustering by Passing Messages Between Data Points
Brendan J. Frey, Delbert Dueck · Science · 2007 · 6.9K citations