International Journal of Molecular Sciences · 2020 · 37 citations · 58 references
Life SciencesCell BiologyMolecular BiologyCytoskeletonGene ExpressionMolecular Cell BiologyCellular MechanicsCytoskeletal ArchitectureCytoskeletal Associated ProteinsCytoskeletal DynamicsCytoskeletal MechanicsCytoskeletal RegulationAdhesionsDifferential Gene ExpressionDifferential Transcript ExpressionLinc Complex MechanicsMicrogravity EffectsNuclear Shape ChangesNuclear Shape RegulationNuclear-cytoskeletal Coupling
Microgravity is known to affect the organization of the cytoskeleton, cell and nuclear morphology and to elicit differential expression of genes associated with the cytoskeleton, focal adhesions and the extracellular matrix. Although the nucleus is mechanically connected to the cytoskeleton through the Linker of Nucleoskeleton and Cytoskeleton (LINC) complex, the role of this group of proteins in these responses to microgravity has yet to be defined. In our study, we used a simulated microgravity device, a 3-D clinostat (Gravite), to investigate whether the LINC complex mediates cellular responses to the simulated microgravity environment. We show that nuclear shape and differential gene expression are both responsive to simulated microgravity in a LINC-dependent manner and that this response changes with the duration of exposure to simulated microgravity. These LINC-dependent genes likely represent elements normally regulated by the mechanical forces imposed by gravity on Earth.
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The Sequence Alignment/Map format and SAMtools
Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text