Life Science Alliance · 2020 · 19 citations · 67 references
Life SciencesCell BiologyImmunologyAutoimmunityInflammationRheumatologyAutoimmune InflammationEffector T Cell FunctionImmune Checkpoint RegulationImmune CheckpointsInflammatory Response RegulationRheumatoid ArthritisAutoimmune Inflammation ControlCd4 Positive T CellsCellular Inflammatory ResponsesEffector Memory T CellsImmune Checkpoint Signaling PathwaysInflammatory T Cell ResponsesInnate Immune Checkpoint RegulationT-cell Homeostatic Proliferation
The transcription factors Egr2 and 3 are essential for controlling inflammatory autoimmune responses of memory phenotype (MP) CD4 T cells. However, the mechanism is still unclear. We have now found that the Egr2 + subset (PD-1 high MP) of MP CD4 T cells expresses high levels of checkpoint molecules (PD-1 and Lag3) and also markers of effector T cells (CXCR3 and ICAM-1). Egr2/3 are not required for PD-1 high MP CD4 cell development but mediate a unique transcriptional programme that effectively controls their inflammatory responses, while promoting homeostatic proliferation and adaptive responses. Egr2 negative PD-1 high MP CD4 T cells are impaired in homeostatic proliferation and adaptive responses against viral infection but display inflammatory responses to innate stimulation such as IL-12. PD-1 high MP CD4 T cells have recently been implicated in rheumatoid arthritis pathogenesis, and we have now found that Egr2 expression is reduced in PD-1 high MP CD4 T cells from patients with active rheumatoid arthritis compared with healthy controls. These findings demonstrate that Egr2/3 control the inflammatory responses of PD-1 high MP CD4 T cells and maintain their adaptive immune fitness.
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The Sequence Alignment/Map format and SAMtools
Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations