Concepedia

Distinct subnetworks of the thalamic reticular nucleus

Yinqing Li, Violeta G. López-Huerta, Xian Adiconis, Kirsten Levandowski, Soonwook Choi, Sean Simmons, Mario A. Arias-García, Baolin Guo, Annie Y. Yao, Timothy R. Blosser,

Nature · 2020 · 212 citations · 52 references

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References

52

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

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RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

Bo Li, Colin N. Dewey · BMC Bioinformatics · 2011 · 23.4K citations · Full text

, , +15

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

Daehwan Kim, Geo Pertea, Cole Trapnell et al. · Genome biology · 2013 · 13.7K citations · Full text

, , +14

DNA targeting specificity of RNA-guided Cas9 nucleases

Patrick D. Hsu, David A. Scott, Joshua A. Weinstein et al. · Nature Biotechnology · 2013 · 4.9K citations · Full text

, , +10

MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data

Greg Finak, Andrew McDavid, Masanao Yajima et al. · Genome biology · 2015 · 3.6K citations · Full text

, , +15