Concepedia

Complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten <i>Hirundo</i> species

Javan K. Carter, Peter A. Innes, April Goebl, Benjamin B. Johnson, Matthew J. Gebert, Ziv Attia, Zachariah Gabani, Ruiqi Li, Tina Melie, Chiara R. Dart,

Mitochondrial DNA Part B · 2020 · 10 citations · 17 references

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17

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

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MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Kazutaka Katoh, Daron M. Standley · Molecular Biology and Evolution · 2013 · 48.3K citations · Full text

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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis · Bioinformatics · 2014 · 34.3K citations · Full text

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SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich, Sergey Nurk, Dmitry Antipov et al. · Journal of Computational Biology · 2012 · 27.2K citations

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tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence

Todd M. Lowe, Sean R. Eddy · Nucleic Acids Research · 1997 · 11.2K citations

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