Biogeographical distribution of dissimilatory nitrate reduction to ammonium (DNRA) bacteria in wetland ecosystems around the world

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

Patrick D. Schloss, Sarah L. Westcott, Thomas Ryabin et al. · Applied and Environmental Microbiology · 2009 · 21.8K citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Search and clustering orders of magnitude faster than BLAST

R. C. Edgar · Bioinformatics · 2010 · 21.7K citations · Full text

Life Sciences, Bioinformatics, Biology +14

FLASH: fast length adjustment of short reads to improve genome assemblies

Tanja Magoč, Steven L. Salzberg · Bioinformatics · 2011 · 15.7K citations · Full text

Life Sciences, Bioinformatics, Microbiology +15

Gephi: An Open Source Software for Exploring and Manipulating Networks

Mathieu Bastian, Sébastien Heymann, Mathieu Jacomy · Proceedings of the International AAAI Conference on Web and Social Media · 2009 · 11.3K citations · Full text

Computing, Data Science, Visualization +17

The igraph software package for complex network research

Gábor Csárdi, Tamás Nepusz · Medical Entomology and Zoology · 2006 · 10.4K citations

Computing, Biostatistics, Computer Networks +10