ACS Omega · 2020 · 19 citations · 47 references
Life SciencesBiologyMolecular BiologyChromatin StructureDna ReplicationStructural BiologyChromatinReplication In EukaryotesReplication InitiationReplication OriginsStructural MotifsDna Secondary StructureDna Sequence CompositionDna Structural MotifsPromoter Sequence MotifsReplication Origin FlexibilityReplication Origin StructureReplication Origins In EukaryotesSequence Determinants Of Replication Origins
do not have such features in their Oris, and instead, they show high preponderance of G-rich sequence motifs such as putative G-quadruplexes or i-motifs and CpG islands. Our extensive study applies the DNA structural feature computation to delve into origins of replication across organisms ranging from yeasts to mammals and including a plant. Insights from this study would be significant in understanding origin architecture and help in designing new algorithms for predicting DNA trans-acting factor recognition events.
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The role of DNA shape in protein–DNA recognition
Remo Rohs, Sean M. West, Alona Sosinsky et al. · Nature · 2009 · 1.1K citations · Full text
Highly prevalent putative quadruplex sequence motifs in human DNA
Alan K. Todd · Nucleic Acids Research · 2005 · 965 citations · Full text