medRxiv · 2020 · 13 citations · 38 references
Veterinary MedicineHealth PolicyInfectious DiseasesEpidemiologic MethodsEpidemiologyInfectious Disease EpidemiologyBayesian InferenceBayesian Model BuildingBayesian StatisticsPandemic ResponseTransmission DynamicsBayesian Disease ModelingCase Detection RateDetectionEpidemiological Compartment ModelsExponential GrowthExponential Phase DynamicsExponential Population GrowthPolicy Decisions
Abstract Using a Bayesian approach to epidemiological compartmental modeling, we demonstrate the “bomb-like” behavior of exponential growth in COVID-19 cases can be explained by transmission of asymptomatic and mild cases that are typically unreported at the beginning of pandemic events due to lower prevalence of testing. We studied the exponential phase of the pandemic in Italy, Spain, and South Korea, and found the R 0 to be 2.56 (95% CrI, 2.41-2.71), 3.23 (95% CrI, 3.06-3.4), and 2.36 (95% CrI, 2.22-2.5) if we use Bayesian priors that assume a large portion of cases are not detected. Weaker priors regarding the detection rate resulted in R 0 values of 9.22 (95% CrI, 9.01-9.43), 9.14 (95% CrI, 8.99-9.29), and 8.06 (95% CrI, 7.82-8.3) and assumes nearly 90% of infected patients are identified. Given the mounting evidence that potentially large fractions of the population are asymptomatic, the weaker priors that generate the high R 0 values to fit the data required assumptions about the epidemiology of COVID-19 that do not fit with the biology, particularly regarding the timeframe that people remain infectious. Our results suggest that models of transmission assuming a relatively lower R 0 value that do not consider a large number of asymptomatic cases can result in misunderstanding of the underlying dynamics, leading to poor policy decisions and outcomes.
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Stephen A. Lauer, Kyra H. Grantz, Qifang Bi et al. · Annals of Internal Medicine · 2020 · 6.6K citations · Full text
Veterinary Medicine, Infectious Disease Control, Infectious Diseases +17
Presumed Asymptomatic Carrier Transmission of COVID-19
Yan Bai, Tao Wei, Fei Tian et al. · JAMA · 2020 · 4.9K citations · Full text
Veterinary Medicine, Infectious Diseases, Infectious Disease Epidemiology +10
Temporal dynamics in viral shedding and transmissibility of COVID-19
Xi He, Eric H. Y. Lau, Peng Wu et al. · Nature Medicine · 2020 · 4.7K citations · Full text
Veterinary Medicine, Infectious Disease Control, Infectious Diseases +17