Concepedia

Comparing high throughput sequencing and real time qPCR for characterizing entomopathogenic nematode biogeography

Alexandros Dritsoulas, Raquel Campos‐Herrera, Rubén Blanco-Pérez, Larry W. Duncan

Soil Biology and Biochemistry · 2020 · 27 citations · 45 references

DOI

Concepts

References

45

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Julie Thompson, Desmond G. Higgins, Toby J. Gibson · Nucleic Acids Research · 1994 · 64.9K citations · Full text

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DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations

, , +9

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

Stéphane Guindon, Olivier Gascuel · Systematic Biology · 2003 · 17K citations · Full text

, , +17

MultiQC: summarize analysis results for multiple tools and samples in a single report

Philip Ewels, Måns Magnusson, Sverker Lundin et al. · Bioinformatics · 2016 · 10.4K citations · Full text

, , +11

Exact sequence variants should replace operational taxonomic units in marker-gene data analysis

Benjamin J. Callahan, Paul J. McMurdie, Susan Holmes · The ISME Journal · 2017 · 3.4K citations · Full text

, , +14