Using whole-genome SNP data to reconstruct a large multi-generation pedigree in apple germplasm

References

Page 1

	Year	Citations
PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses Shaun Purcell, Benjamin M. Neale, Katherine EO Todd-Brown, The American Journal of Human Genetics Genome-wide Association StudyWhole-genome AssociationLinkage DisequilibriumGenotype-phenotype AssociationPopulation-based Linkage Analyses	2007	34.9K
High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development Nicolas Daccord, Jean‐Marc Celton, Gareth Linsmith, Nature Genetics	2017	1K
Genetic structure and domestication history of the grape Sean Myles, Adam R. Boyko, Christopher L. Owens, Proceedings of the National Academy of Sciences	2011	766
Assumption-Free Estimation of Heritability from Genome-Wide Identity-by-Descent Sharing between Full Siblings Peter M. Visscher, Sarah E. Medland, Manuel A. R. Ferreira, PLoS Genetics GeneticsLinkage AnalysisNatural SelectionDominance Genetic VarianceGenome-wide Association Study	2006	647
DNA fingerprinting in birds Terry Burke, Michael W. Bruford Nature BiologyPhylogeneticsMolecular EcologyNatural SciencesMedicine	1987	555
A practical guide to methods of parentage analysis Adam G. Jones, Clayton M. Small, Kimberly A. Paczolt, Molecular Ecology Resources Parental CareMolecular Evolutionary EcologyGeneticsGenomicsPhylogenetics	2009	496
New Insight into the History of Domesticated Apple: Secondary Contribution of the European Wild Apple to the Genome of Cultivated Varieties Amandine Cornille, Pierre Gladieux, M.J.M. Smulders, PLoS Genetics BotanyGeneticsGenomicsDomesticationPlant Genomics	2012	412
DNA fingerprints of dogs and cats A.J. Jeffreys, D. B. Morton Animal Genetics	1987	386
<b>network</b>: A Package for Managing Relational Data in<i>R</i> Carter T. Butts Journal of Statistical Software Relational DatabaseEngineeringComputer ArchitectureNetwork AnalysisGraph Database	2008	367
Microsatellite DNA in peach (<i>Prunus persica</i>L. Batsch) and its use in fingerprinting and testing the genetic origin of cultivars R. Testolin, T. Marrazzo, Guido Cipriani, Genome	2000	328

Page 1