PLoS ONE · 2020 · 12 citations · 34 references
Life SciencesInfectious DiseasesMolecular BiologyComparative GenomicsMolecular VirologyVirologyAnimal VirusesVeterinary VirologyViral GeneticsViral GenomicsViral InfectionsViral PathogenesisCanine ParvovirusesComparative Viral PhylogeneticsFeline Infectious DiseasesFeline VirologyFeline VirusesPhylogenetic Character AnalysisVirus Evolution AnalysisVirus Evolutionary Relationships
Protoparvoviruses, widespread among cats and wild animals, are responsible for leukopenia. Feline panleukopenia virus (FPLV) in domestic cats is genetically diverse and some strains may differ from those used for vaccination. The presence of FPLV in two domestic cats from Hebei Province in China was identified by polymerase chain reaction. Samples from these animals were used to isolate FPLV strains in CRFK cells for genome sequencing. Phylogenetic analysis was performed to compare our isolates with available sequences of FPLV, mink parvovirus (MEV) and canine parvovirus (CPV). The isolated strains were closely related to strains of FPLV/MEV isolated in the 1960s. Our analysis also revealed that the evolutionary history of FPLV and MEV is characterized by local adaptations in the Vp2 gene. Thus, it is likely that new FPLV strains are emerging to evade the anti-FPLV immune response.
34
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
Sudhir Kumar, Glen Stecher, Michael Li et al. · Molecular Biology and Evolution · 2018 · 38.8K citations · Full text
Clustal W and Clustal X version 2.0
Mark Larkin, Gordon Blackshields, Nigel P. Brown et al. · Bioinformatics · 2007 · 29.1K citations · Full text
RDP4: Detection and analysis of recombination patterns in virus genomes
Darren P. Martin, Ben Murrell, Michael Golden et al. · Virus Evolution · 2015 · 3.4K citations · Full text
Susan F. Cotmore, Mavis Agbandje‐McKenna, John A. Chiorini et al. · Archives of Virology · 2013 · 689 citations · Full text