Scientific Reports · 2020 · 63 citations · 49 references
Life SciencesAnimal SciencesBiochemistryMetabolomicsMolecular DiagnosticsProduction Animal MedicineMetabolite ExtractionMetabolite ProfilingMetabolite QuantificationMetabolomics Data AnalysisNuclear Magnetic Resonance MetabolomicsUntargeted MetabolomicsBlood-based BiomarkersDiagnostic Testing AccuracyDisease Biomarker DiscoveryMetabolite-based DiagnosticsMetabolomic Biomarker DiscoveryMetabolomic BiomarkersMetabolomic DiagnosticsRegression Trees
Abstract Current diagnosis methods for Bovine Respiratory Disease (BRD) in feedlots have a low diagnostic accuracy. The current study aimed to search for blood biomarkers of BRD using 1 H NMR metabolomics and determine their accuracy in diagnosing BRD. Animals with visual signs of BRD (n = 149) and visually healthy (non-BRD; n = 148) were sampled for blood metabolomics analysis. Lung lesions indicative of BRD were scored at slaughter. Non-targeted 1 H NMR metabolomics was used to develop predictive algorithms for disease classification using classification and regression trees. In the absence of a gold standard for BRD diagnosis, six reference diagnosis methods were used to define an animal as BRD or non-BRD. Sensitivity (Se) and specificity (Sp) were used to estimate diagnostic accuracy (Acc). Blood metabolomics demonstrated a high accuracy at diagnosing BRD when using visual signs of BRD (Acc = 0.85), however was less accurate at diagnosing BRD using rectal temperature (Acc = 0.65), lung auscultation score (Acc = 0.61) and lung lesions at slaughter as reference diagnosis methods (Acc = 0.71). Phenylalanine, lactate, hydroxybutyrate, tyrosine, citrate and leucine were identified as metabolites of importance in classifying animals as BRD or non-BRD. The blood metabolome classified BRD and non-BRD animals with high accuracy and shows potential for use as a BRD diagnosis tool.
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