Nature Cancer · 2020 · 241 citations · 64 references
MedicineCancer BiologyOncologyMetastasisMolecular OncologyTumor MicroenvironmentCancer Cell-cell CommunicationCancer ProgressionCancer Stem Cell MaintenanceCancer Stem CellsColorectal CancerMetastatic Niche FormationCancer Metastasis MechanismsColorectal Carcinogenesis PathophysiologyMetastasis InitiationMetastatic Cancer Stem CellsStemness In Metastatic InitiationTumor Initiating CellsTumor Metastasis Biology
64
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
Cutadapt removes adapter sequences from high-throughput sequencing reads
Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 30.4K citations · Full text
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.9K citations · Full text