Concepedia

HNF4 Regulates Fatty Acid Oxidation and Is Required for Renewal of Intestinal Stem Cells in Mice

Lei Chen, Roshan P. Vasoya, Natalie H. Toke, Aditya Parthasarathy, Shirley Luo, Eric Chiles, Juan Flores, Nan Gao, Edward M. Bonder, Xiaoyang Su,

Gastroenterology · 2019 · 256 citations · 52 references

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52

Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha et al. · Proceedings of the National Academy of Sciences · 2005 · 56.7K citations · Full text

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Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.9K citations · Full text

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Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

Sven Heinz, Christopher Benner, Nathanael J. Spann et al. · Molecular Cell · 2010 · 14.6K citations · Full text

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Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

Cole Trapnell, Adam Roberts, Loyal A. Goff et al. · Nature Protocols · 2012 · 12.9K citations · Full text

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deepTools2: a next generation web server for deep-sequencing data analysis

Fidel Ramírez, Devon Ryan, Björn Grüning et al. · Nucleic Acids Research · 2016 · 9K citations · Full text

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