Microbiology Resource Announcements · 2019 · 13 citations · 11 references
Life SciencesMicrobiologyVeterinary MicrobiologyGenomicsMedical MicrobiologyMicrobial GenomicsAntibiotic ResistanceAntibiotic Resistance GeneticsAntimicrobial Resistance GenomicsGenome SequencingPathogen GenomicsResistance GenesAcinetobacter Baumannii ResistanceAntimicrobial Resistance Gene DetectionAntimicrobial Resistance PatternsComparative Genomics Of ResistancePathogen Genome AssemblyPathogen Genome SequencingResistance Gene TypingResistance Phenotype Prediction
strain 161514, which was recovered from a horse with conjunctivitis, and determine the genetic basis of its antimicrobial resistance phenotype. The genome has a size of 3,839,365 bp and a G+C content of 38.93% and is predicted to contain 3,529 coding sequences. The isolate belongs to sequence type 462 (ST462) according to the Oxford scheme (Abaumannii1) and to ST46 according to the Pasteur scheme (Abaumannii2).
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The RAST Server: Rapid Annotations using Subsystems Technology
Ramy K. Aziz, Daniela Bartels, Aaron A. Best et al. · BMC Genomics · 2008 · 11.8K citations · Full text
QUAST: quality assessment tool for genome assemblies
Alexey Gurevich, Vladislav Saveliev, Nikolay Vyahhi et al. · Bioinformatics · 2013 · 11.5K citations · Full text
NCBI prokaryotic genome annotation pipeline
Tatiana Tatusova, Michael DiCuccio, Azat Badretdin et al. · Nucleic Acids Research · 2016 · 7K citations · Full text
Identification of acquired antimicrobial resistance genes
Ea Zankari, Henrik Hasman, Salvatore Cosentino et al. · Journal of Antimicrobial Chemotherapy · 2012 · 5.2K citations · Full text