Concepedia

Thiouridine-to-Cytidine Conversion Sequencing (TUC-Seq) to Measure mRNA Transcription and Degradation Rates

Alexandra Lusser, Catherina Gasser, Lukas Trixl, Paolo Piatti, Isabel Delazer, Dietmar Rieder, Christian Riml, Thomas Amort, Ronald Micura

Methods in molecular biology · 2019 · 26 citations · 13 references

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13

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin, Carrie Davis, Felix Schlesinger et al. · Bioinformatics · 2012 · 56.2K citations · Full text

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead, Cole Trapnell, Mihai Pop et al. · Genome biology · 2009 · 23K citations · Full text

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VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing

Daniel C. Koboldt, Qunyuan Zhang, David E. Larson et al. · Genome Research · 2012 · 5.3K citations · Full text

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FLEXBAR—Flexible Barcode and Adapter Processing for Next-Generation Sequencing Platforms

Matthias Dodt, Johannes T. Roehr, Rina Ahmed-Begrich et al. · Biology · 2012 · 767 citations · Full text

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Thiol-linked alkylation of RNA to assess expression dynamics

Veronika A. Herzog, Brian Reichholf, Tobias Neumann et al. · Nature Methods · 2017 · 693 citations · Full text

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