Journal of the American Chemical Society · 2019 · 227 citations · 35 references
Natural SciencesBiochemistryBiophysicsBiomolecular ModelingMolecular BiophysicsStructural BiologyMacromolecular AssemblyMacromolecular InteractionsNucleic Acid DynamicsProtein-nucleic Acid InteractionsRna BiophysicsRna-binding ProteinsElectrostatic Interactions In CondensationLiquid - Liquid Phase SeparationLiquid-liquid Phase SeparationLong-range Electrostatic InteractionsNucleic Acid Base PairingPhase CoexistenceRibonucleoprotein CondensationRna-protein Complexes
In eukaryotic cells, ribonucleoproteins (RNPs) form mesoscale condensates by liquid-liquid phase separation that play essential roles in subcellular dynamic compartmentalization. The formation and dissolution of many RNP condensates are finely dependent on the RNA-to-RNP ratio, giving rise to a windowlike phase separation behavior. This is commonly referred to as reentrant liquid condensation (RLC). Here, using ribonucleoprotein-inspired polypeptides with low-complexity RNA-binding sequences as well as an archetypal disordered RNP, fused in sarcoma, as model systems, we investigate the molecular driving forces underlying this nonmonotonous phase transition. We show that an interplay between short-range cation-π attractions and long-range electrostatic forces governs the heterotypic RLC behavior of RNP-RNA complexes. Short-range attractions, which can be encoded by both polypeptide chain primary sequence and nucleic acid base sequence, control the two-phase coexistence regime, regulate material properties of polypeptide-RNA condensates, and oppose condensate reentrant dissolution. In the presence of excess RNA, a competition between short-range attraction and long-range electrostatic repulsion drives the formation of a colloidlike cluster phase. With increasing short-range attraction, the fluid dynamics of the cluster phase is arrested, leading to the formation of a colloidal gel. Our results reveal that phase behavior, supramolecular organization, and material states of RNP-RNA assemblies are controlled by a dynamic interplay between molecular interactions at different length scales.
35
Polymer physics of intracellular phase transitions
Clifford P. Brangwynne, Péter Tompa, Rohit V. Pappu · Nature Physics · 2015 · 1.7K citations
Shana Elbaum‐Garfinkle, Younghoon Kim, Krzysztof Szczepaniak et al. · Proceedings of the National Academy of Sciences · 2015 · 1.4K citations · Full text
RNA buffers the phase separation behavior of prion-like RNA binding proteins
Shovamayee Maharana, Jie Wang, Dimitrios K. Papadopoulos et al. · Science · 2018 · 1.2K citations · Full text