Transcriptome-wide dynamics of extensive m6A mRNA methylation during Plasmodium falciparum blood-stage development

References

Page 1

	Year	Citations
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 Michael I. Love, Wolfgang Huber, Simon Anders Genome biology	2014	94.7K
Basic local alignment search tool Stephen F. Altschul, Warren Gish, Webb Miller, Journal of Molecular Biology BioinformaticsEngineeringInformation RetrievalString-searching AlgorithmString Processing	1990	92.8K
The Sequence Alignment/Map format and SAMtools Heng Li, Alec Wysoker, Tim Fennell, Bioinformatics	2009	64.7K
Fast and accurate short read alignment with Burrows–Wheeler transform Heng Li, Richard Durbin Bioinformatics	2009	60.7K
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0 Koichiro Tamura, Glen Stecher, Daniel S. Peterson, Molecular Biology and Evolution	2013	47.5K
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability Kazutaka Katoh, Daron M. Standley Molecular Biology and Evolution GeneticsMolecular BiologyMajor UpdateGenomicsSequence Alignment	2013	45.6K
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets Sudhir Kumar, Glen Stecher, Koichiro Tamura Molecular Biology and Evolution	2016	44.6K
<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data Mark D. Robinson, Davis J. McCarthy, Gordon K. Smyth Bioinformatics	2009	42.7K
BEDTools: a flexible suite of utilities for comparing genomic features Aaron R. Quinlan, Ira M. Hall Bioinformatics	2010	28.9K
HTSeq—a Python framework to work with high-throughput sequencing data Simon Anders, Paul Theodor Pyl, Wolfgang Huber Bioinformatics	2014	21.9K

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